BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB032E02SP1|AL429577
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig517 1738 0.0
>3x_Contig517
Length = 2651
Score = 1738 bits (876), Expect = 0.0
Identities = 880/882 (99%)
Strand = Plus / Plus
Query: 1 tccaagagggaagtgttgccgcacaggatggaaatagcgacaacgaaaacaacgaagatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 tccaagagggaagtgttgccgcacaggatggaaatagcgacaacgaaaacaacgaagatt 809
Query: 61 ccgaggatgaatacggtggaaccagccatgtagaagaatacatggtcagattcattgcca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 ccgaggatgaatacggtggaaccagccatgtagaagaatacatggtcagattcattgcca 869
Query: 121 atggattctactactgattgtgtactatattgcaccaacacatttcatgatctattcact 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 870 atggattctactactgattgtgtactatattgcaccaacacatttcatgatctattcact 929
Query: 181 ctgtttagctcagtgtattcataagaacttttagcatcaaatcacttttttttcagactc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 930 ctgtttagctcagtgtattcataagaacttttagcatcaaatcacttttttttcagactc 989
Query: 241 atccatatatagaaaataccacaatataatagactttttaccaccttgcaggccttgtag 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 990 atccatatatagaaaataccacaatataatagactttttaccaccttgcaggccttgtag 1049
Query: 301 tggtcaccctatggaccactctgttcttatgccggtaaattacgtatctactgaagggct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1050 tggtcaccctatggaccactctgttcttatgccggtaaattacgtatctactgaagggct 1109
Query: 361 gctagccgcctggtgctcttttgtccataatgttcctttgcggtaagttctgccagcaga 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1110 gctagccgcctggtgctcttttgtccataatgttcctttgcggtaagttctgccagcaga 1169
Query: 421 caggcaggcagcatcctcagactaccgaagaactaaaaaaaaaaaaaaaaaaaaaaaagt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1170 caggcaggcagcatcctcagactaccgaagaactaaaaaaaaaaaaaaaaaaaaaaaagt 1229
Query: 481 tgttccgttgccggtggaaacctggtcgaagcgatcccgcttctttaatgttcaacttct 540
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1230 tgatccgttgccggtggaaacctggtcgaagcgatcccgcttctttaatgttcaacttct 1289
Query: 541 tgaattgcttccagtgacttccttgttttccttggtttcctcggtgtccaaggcttgcta 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1290 tgaattgcttccagtgacttccttgttttccttggtttcctcggtgtccaaggcttgcta 1349
Query: 601 atccttccaattgaatgtacgtttgcggcgcctcgttggtggacatcacgtcttgtcatt 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1350 atccttccaattgaatgtacgtttgcggcgcctcgttggtggacatcacgtcttgtcatt 1409
Query: 661 actgacaagttttgctttttttttaccatagcycatatgtttggatttcgttaaccatta 720
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 1410 actgacaagttttgctttttttttaccatagctcatatgtttggatttcgttaaccatta 1469
Query: 721 cgtaacgaataaagggtcagaaagcatttctatagcaaaatgtgttgggtcaaacgtacg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1470 cgtaacgaataaagggtcagaaagcatttctatagcaaaatgtgttgggtcaaacgtacg 1529
Query: 781 atagaacaagttcgaagctttaattcctaaacggttcattttcctaaaacgtatataaat 840
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1530 atagaacaagttcgaagctttaattcctaaacggttcattttcctaaaacgtatataaat 1589
Query: 841 agcttcccttgagcatattcaaggatcctatgtatagcttct 882
||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1590 agcttcccttgagcatattcaaggatcctatgtatagcttct 1631
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 24,625
Number of Sequences: 1807
Number of extensions: 24625
Number of successful extensions: 5440
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.7 bits)